Insertion junction: CLIP2.077239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077239
Chromosome:chromosome 3
Location:4090421
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g172250 (1 of 1) PTHR11649:SF5 - GTP-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACGCCCCCAACCCCACAGAGATGCCGCAGACGGTGTACGA
Internal bar code:TGACACTCGAATTGTATTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTCATCGTCCGAGTCCG
Suggested primer 2:CAAATCCTGCCTTGGCACAC