Insertion junction: CLIP2.077246_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077246
Chromosome:chromosome 12
Location:3184899
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g500250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGCAGTGCTGCCTAGCACAGCAGGGCCGCAGCTAGCCGACCTAGGA
Internal bar code:ATGCTGCTGTCTGTTAGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGGGCCGTCTCATGATG
Suggested primer 2:GGGTAGTGGCTTGCAGCTAA