Insertion junction: CLIP2.077248_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077248
Chromosome:chromosome 16
Location:4406100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATGGAGGGACTCTGAGACGCTGGACCGGCCCGCTCGCTTGGATGGG
Internal bar code:TGTCATTCAAATCGAGGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2325
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTTGTGCAGGAATCCCC
Suggested primer 2:GCGCTTGTTTCGGGACTTTT