Insertion junction: CLIP2.077255_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077255
Chromosome:plastome
Location:187071
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802331 2716963,ChreCp066,psbC (1 of 1) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC); photosystem II 43 kDa protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGAATAAGTTCATAGCACCTGCCCAGAAAACAATTAGACCCGCGTGA
Internal bar code:TGTAAACCGTTTTGGTATCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATGGTGGCAAGTTCGA
Suggested primer 2:CCAGACCAAACGAAAGCACG