Insertion junction: CLIP2.077261_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077261
Chromosome:chromosome 17
Location:3460776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723650 KAT1,ATO1 (1 of 1) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase; 3-oxoacyl CoA thiolase/acetyl-CoA acyltransferase 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTTTGGGTTGACGAGAGCTGCACACGAGCGGTAATACGTAAGCGTT
Internal bar code:GACAAGCTTTAGACATGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:315
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGTCTTCGTCACTGCC
Suggested primer 2:GCTTCTCGGATCTCTGCTCC