Insertion junction: CLIP2.077268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077268
Chromosome:chromosome 9
Location:4924013
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g403182 SPT6 (1 of 1) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAACCCGCCCACACGCCTGCCTCGCCTCCTGCGCCTCACATGCCCCC
Internal bar code:CCCATTCCATAAACGAGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGAAGGGGAGGAGATTA
Suggested primer 2:TCAACTCCCTCCCTCGGTAG