Insertion junction: CLIP2.077272_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077272
Chromosome:chromosome 3
Location:8619963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210289 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAGAGACGCGTGTCCTGTGGTGGTACTTGAAGCCAACACGGTGGCT
Internal bar code:TGATGTGTGACGTTAGGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1944
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCATCCGCCTCTTCACC
Suggested primer 2:GGTAAGATCTGGCGATCCCG