Insertion junction: CLIP2.077277_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077277
Chromosome:chromosome 10
Location:3226702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTCAGGGCCCGGCACCATGACGGTGTCCACCCCATCATGCTACCCCA
Internal bar code:TAGGTGGACAGCGGTAAACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGACATGCTACTGGC
Suggested primer 2:GCTTTTCTCTCCGTGGACCA