Insertion junction: CLIP2.077279_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077279
Chromosome:chromosome 6
Location:4843921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280300 (1 of 1) PTHR11254//PTHR11254:SF324 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGATAGCGGCATCGGCCGCAGTCGGAATCGCTGGATCCGAAATCC
Internal bar code:AGGTTTCGGCTCTCGGGTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2829
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTTCTGGAGGTCGAGT
Suggested primer 2:CGCAGAGTAGCAGGGATGAG