Insertion junction: CLIP2.077287_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077287
Chromosome:chromosome 1
Location:33849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000050 RWP14 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCACATGCGACCTAGCAGGCGAGGACGGCAAGGACAGGTGCAACCAT
Internal bar code:CTGCTTTAGCAATATCACGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3476
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGGGCCTCTTAAGTTGA
Suggested primer 2:CACAGCCAAGTGAGTGCCTA