Insertion junction: CLIP2.077290_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077290
Chromosome:chromosome 2
Location:1070377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080350 (1 of 1) K11836 - ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] (USP5_13, UBP14) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCCCGAGCTTTCCATGTGGCCATGTCTCTTCCGGTCATCCATGTTGC
Internal bar code:GGTGTTACGGGTGTCCTCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGAAGGACGGCAGGTG
Suggested primer 2:AAGCACAAGGTTGGTGGTGA