Insertion junction: CLIP2.077291_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077291
Chromosome:chromosome 9
Location:5079566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406200 PRORS1,TSO1 organellar class II (G, H%252C P and S) tRNA synthetase; (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACATGCGTGCCAGCGCGTGTGCCCCCGGCACGCCGGGTAGTCCATCCC
Internal bar code:TGTTGGTCTAATTGGGGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTTGCAACACCGATGC
Suggested primer 2:CTATTTGGCGCGAAACCGAG