Insertion junction: CLIP2.077302_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077302
Chromosome:chromosome 15
Location:1187767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGGCTGCGATGGCGAGTGATGACCACTAGGGCGTGTCATGCACAT
Internal bar code:TTACATCGGTGAAGGCGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1332
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACGCTTGGTAAAGTAG
Suggested primer 2:TGACGCGCATCCCTCTAATC