Insertion junction: CLIP2.077302_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077302
Chromosome:chromosome 15
Location:1187768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTGCGGGCCATGTTCCAGCGCTCCACATCGTGTTCCTTATATCATCA
Internal bar code:TTACATCGGTGAAGGCGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGCGCATCCCTCTAATC
Suggested primer 2:GCGCACGCTTGGTAAAGTAG