Insertion junction: CLIP2.077304_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077304
Chromosome:chromosome 5
Location:1255311
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g241637 FAP32,IFT46 Intraflagellar transport protein 46; (1 of 1) PTHR13376//PTHR13376:SF0 - UNCHARACTERIZED // INTRAFLAGELLAR TRANSPORT PROTEIN 46 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCATAATTAATTAAGAAGAGAAGGCGTAGCCAGGTACAGTAGCATAG
Internal bar code:AACTACCATACAGGCGTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:419
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCTTCTCCCACCCGCTC
Suggested primer 2:AATGCAGATGAGGTGGGTGG