Insertion junction: CLIP2.077307_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077307
Chromosome:chromosome 12
Location:2434448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507550 OPR3 OctotricoPeptide Repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAGAGTACCGAGGTCTCCAGTGGTTCGTGCCAACACGTGCCAACACG
Internal bar code:ACTAGGGTCATTCGGAGTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2394
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGCCTAGCAACTCATT
Suggested primer 2:TGTTCACTACTGGCACGTCC