Insertion junction: CLIP2.077311_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077311
Chromosome:chromosome 9
Location:5213311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTCACTCACACTCAACCCGGCCCAGCCCGGAAGCTGCTGGTGTTCCG
Internal bar code:ATTTCCGTCTACGTGGTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:932
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGTCGTGGATGGATT
Suggested primer 2:TACCGATGCTGCTGCTACTG