Insertion junction: CLIP2.077312_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077312
Chromosome:chromosome 3
Location:137345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143907 (1 of 1) PTHR10615//PTHR10615:SF103 - HISTONE ACETYLTRANSFERASE // MYST-LIKE HISTONE ACETYLTRANSFERASE 1-RELATED 3'UTR
Cre03.g143927 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTATTCAGCGATGCCGAGCCGGCCAGCCACCATCGTGGGGCATCCCCA
Internal bar code:ATGACGTTGATTAGGGTACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:54.9296
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCAGAAAGGCCAGGTGC
Suggested primer 2:GCAGGACATGGCAAAGCAAA