Insertion cassette: | CIB2 |
Side of cassette: | 3' truncated? |
Strand: | - |
Strain: | CLIP2.077332 |
Chromosome: | plastome |
Location: | 100270 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
CreCp.g802306 | 2716993,ChreCp042,rpoB1 | (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit I | 5'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TGCAGGGTTAGACAAAGAAACATGACTCACTGTCTATATGTTAAATATTT |
Internal bar code: | GAGCATCTTGCCCTCATAGTAG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 116 |
LEAP-Seq percent confirming: | 36.3636 |
LEAP-Seq n confirming: | 12 |
LEAP-Seq n nonconfirming: | 21 |
LEAP-Seq n unique pos: | 33 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | AATCCACACTGGCCGGTAAG |
Suggested primer 2: | GGTTTGAGCTAATAGGGCCGT |