Insertion junction: CLIP2.077346_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077346
Chromosome:chromosome 8
Location:4427761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385400 (1 of 3) 3.5.1.1 - Asparaginase / L-asparagine amidohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTTCGCTAAGTCATGTGTCCAGCACACGATGGCAAAGAATGAGTTAC
Internal bar code:TAGTTAGAGAATCATACTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACACCATGCTCAAAAGG
Suggested primer 2:GTCACCAGCACGAAACACAC