Insertion junction: CLIP2.077352_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077352
Chromosome:chromosome 16
Location:2107066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657700 (1 of 2) PF13661 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy_4) 5'UTR
Cre16.g657800 CCD3,CCD2 (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1); Carotenoid cleavage dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATCGCACCGGGCACCACCTTCTCCTAAGCCCCATATCGCAGTTATG
Internal bar code:GTAATAATCGGCCTGATATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5260
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCAGGCGATTCGATTGG
Suggested primer 2:CCAGAATGTAAGCCCCGTGT