Insertion junction: CLIP2.077358_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077358
Chromosome:chromosome 13
Location:1956830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576350 PFP2 Prefoldin-family protein; (1 of 1) K17560 - unconventional prefoldin RPB5 interactor 1 (URI1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACCTCACTTGAACGCGTCTCTGCCTTGCGACGTTCCATCTGCGCCG
Internal bar code:TTATGTTACTTGTTTACCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTCCACACTCTGCGAAA
Suggested primer 2:GAAAGCTGCGTGCAGTCAAA