Insertion junction: CLIP2.077366_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077366
Chromosome:plastome
Location:27026
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802276 ChreCp014,2717057,rpl16 (1 of 1) PTHR12220//PTHR12220:SF14 - 50S/60S RIBOSOMAL PROTEIN L16 // SUBFAMILY NOT NAMED; 50S ribosomal protein L16 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATCCTGGTAAAATTTTATATGAAATGCAAGGTGTATCTGAAACAATT
Internal bar code:AACTTCGGCGATTCCCAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACCAAGAGCACGAATA
Suggested primer 2:CATGAACGCTGCCAAAGGAG