Insertion junction: CLIP2.077369_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077369
Chromosome:chromosome 12
Location:9663203
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g557503 (1 of 5) PF13676 - TIR domain (TIR_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGGCGGGCGGGCGGGCGGTGTAGGCCAGTGCGGGGCCACCAAGAGC
Internal bar code:ACCTTTCTCGTGTAGTAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACAAACAGGCAGCACGC
Suggested primer 2:CCTGGAAGTGGCTGAGGAAG