Insertion junction: CLIP2.077370_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077370
Chromosome:chromosome 9
Location:5988818
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g412400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACGAGGGTAAGGGCGGGGTCCAAGCCGGGTGCGGGTGCGGCAGCAGA
Internal bar code:TTCTTCTACGCCTCTCTTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACACCAGCTTGACGGT
Suggested primer 2:AAGATTGGCCGGGTAAACGT