Insertion junction: CLIP2.077372_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077372
Chromosome:chromosome 9
Location:5707614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGGGACGTTCTCGACTCGAGAACGGAGGGAATGAGCCATCCGCATC
Internal bar code:ATGCTTTCAACGGGGCCTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2238
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAACAGTGTTGGTGGAAG
Suggested primer 2:TTGCTTGCATCTCCGTGTCT