Insertion junction: CLIP2.077379_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077379
Chromosome:chromosome 6
Location:906766
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g255950 (1 of 1) K14553 - U3 small nucleolar RNA-associated protein 18 (UTP18) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCGCGCGCACGTTGCCGCTCATGCGCAGCGAGGCCACCCACTGCCG
Internal bar code:AGAGCTTGTCTTCTGCGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGTGAGGATGAGGCAAA
Suggested primer 2:GTCCAGGCTGTGCACATAGT