Insertion junction: CLIP2.077380_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077380
Chromosome:chromosome 16
Location:1489321
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGCCTTTGAGGTTGGGGCGCGGCATTGTTGCCTTTAAAACGAGCAG
Internal bar code:TGCCCTGGCGAGGTTTGAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACCTGAAGCAAGAGCAG
Suggested primer 2:ACTGGCGTGTGTGTGTATGT