Insertion junction: CLIP2.077384_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077384
Chromosome:chromosome 9
Location:3675328
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g397142 ADF1,TRP15 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Acid-induced Ca transient receptor channel 5'UTR
Cre09.g397179 OPR13 OctotricoPeptide Repeat protein 13 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTTGAGGAGAACAAAAGGAACCGCTCCATCAGCGAATTGCGAATTG
Internal bar code:TGATTTATAGCGTATCACGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCACACACACCCTAC
Suggested primer 2:TTGCCTGCATGGACCCTTTC