Insertion junction: CLIP2.077408_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077408
Chromosome:chromosome 3
Location:8053775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGGTCTTGGGCAGTTTCCCTCCCGAGGGATGATCGGCACGGGGCAG
Internal bar code:TATCATAGACTACATATCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1885
LEAP-Seq percent confirming:65.9574
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGAAGGTGCGTGTA
Suggested primer 2:CGATGTAGATGGCGTCGTGA