Insertion junction: CLIP2.077413_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077413
Chromosome:chromosome 9
Location:3541261
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396475 (1 of 1) PTHR24202//PTHR24202:SF4//PTHR24202:SF52 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE MIB2 // E3 UBIQUITIN-PROTEIN LIGASE MIB1 5'UTR
Cre09.g396485 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCCTTGTCGATGGAGGTCACCAGGTTGGTCTGGGTCTCGGCAGTGC
Internal bar code:GAGATCGACAAACGATATATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGAAGAGGACGTAGCCG
Suggested primer 2:TTGTCAAGTAGCGCCAGGAG