Insertion junction: CLIP2.077414_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077414
Chromosome:chromosome 17
Location:6774268
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g746647 PUF2 (1 of 1) PTHR12537:SF12 - MATERNAL PROTEIN PUMILIO; Puf protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGGGCGCGCACGGCGTGGCGCTACAGCTGCACCAGCAGGCGCACAT
Internal bar code:TATGCACGACCAAGATTCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCCTTCATCATGGCCTG
Suggested primer 2:ACCTCATGACCGACGTGTTC