Insertion junction: CLIP2.077418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077418
Chromosome:chromosome 9
Location:2613560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392250 OTU5 (1 of 2) IPR000104//IPR003323 - Antifreeze protein, type I // OTU domain; OTU-like cysteine protease 3'UTR
Cre09.g392251 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGGCAAGCAAGCATGGTCAAGCAAGGATGACCGCCCGCGCACGCAC
Internal bar code:GTTAATTAGAGTAATGGTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTGGCTTGCGCATTGT
Suggested primer 2:AAGTGCTAGCGGACTGGTTC