Insertion junction: CLIP2.077419_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077419
Chromosome:chromosome 3
Location:9057611
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g202337 MOT28 (1 of 2) PF14753 - Domain of unknown function (DUF4475) (DUF4475); Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCAGGGCATACTGTGGTCGTAAACTCCGGTTGCTGCTGCTGCTGCTG
Internal bar code:CGTTGATTAAAAAGTTTGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTCGTCACCAACAAAC
Suggested primer 2:CAAATCGCACAGCACACACA