Insertion junction: CLIP2.077420_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077420
Chromosome:chromosome 5
Location:3519196
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g233600 DIV55 [RNA-polymerase]-subunit kinase / CTD kinase; (1 of 13) 2.7.11.23 - [RNA-polymerase]-subunit kinase / CTD kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGCAGGAGCTGGCGGCACCCGCGCAACCCGTTGCACTGGCGGCGGC
Internal bar code:GTGAATGTCGTACCGGGCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCGTCATCCAGGTACG
Suggested primer 2:AGTTTGTCCCTACAGCTGCC