Insertion junction: CLIP2.077423_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077423
Chromosome:chromosome 3
Location:2921951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162750 (1 of 2) K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGCCGGAGCACTGCAGCGCTGTTCACGAAGTTCGCCTGGCCCTCTG
Internal bar code:TCGGGATCCCGGAATGCGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3127
LEAP-Seq percent confirming:93.5897
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTTTCCGAATGCGCATC
Suggested primer 2:CAGCATGCGCATCTTCAGTC