Insertion junction: CLIP2.077431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077431
Chromosome:chromosome 10
Location:3429637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain 3'UTR
Cre10.g444216 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCATACGCCCCCTTCTCGTCTATCTGGCTCGAGTTGCATATCGTCCC
Internal bar code:GTTGTCGTGCGTCGATCATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3052
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAATGTGTTGGGGCAC
Suggested primer 2:CGACCCGGTTCTCAACAAGA