Insertion junction: CLIP2.077435_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077435
Chromosome:chromosome 3
Location:2375223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTATGGCAGCTTCGGGACTGCAGTGTGTGCAGTCCGTAAGAAATGATG
Internal bar code:ATTGGAAGATATCATTCTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1970
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGCGCAAAGTACGAGC
Suggested primer 2:CGCCATCAAGGTTGCGTATG