Insertion junction: CLIP2.077440_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077440
Chromosome:chromosome 6
Location:7948481
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g304300 POA6 20S proteasome alpha subunit F; (1 of 1) K02725 - 20S proteasome subunit alpha 6 (PSMA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGGCCGAGGCGTCGTGGAGCAGCAGGGCAGCAGCAGGGGGGTTAAA
Internal bar code:CCCATTGCCAGAGCCTGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:207
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATACAGGCGAAGAGGTC
Suggested primer 2:CATTGCACGCCGATCTCTTG