Insertion junction: CLIP2.077441_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077441
Chromosome:chromosome 8
Location:1899374
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g367650 MUT11 (1 of 1) K14963 - COMPASS component SWD3 (WDR5, SWD3, CPS30); Transcriptional repression protein 3'UTR
Cre08.g367700 (1 of 1) PTHR28259//PTHR28259:SF1 - FAMILY NOT NAMED // UPF0695 MEMBRANE PROTEIN YOR390W-RELATED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTCCTGAGTCCTGAGCCTCAGTTCCGCAACGGCTCACCACGCCACA
Internal bar code:GGGGCTGATTTGTACTCGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:670
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTCCCCACAACAGCTG
Suggested primer 2:ATCTGGGCTGTAGCATGGTG