Insertion junction: CLIP2.077448_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077448
Chromosome:chromosome 4
Location:305595
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g800432 FTSHi2,CTAP6,FTSHI2 (1 of 3) IPR000642//IPR003593//IPR003959//IPR027417 - Peptidase M41 // AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; Chloroplast-import FtsH-like ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCAATGAAGGACGTCAGGAAACCGTCGTGTCACACGTCAACGACCTA
Internal bar code:TGTTTGGTTCTATTCACCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTGTGAGGAGAAGGGG
Suggested primer 2:TGGTGTTTGGACTGGCACTT