Insertion junction: CLIP2.077454_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077454
Chromosome:chromosome 6
Location:2392878
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g268501 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTCGAGCACATAACCGTCTGCTCCTTCAAACTGCAACACGGCACGCG
Internal bar code:GGGGATGAGTGTCGAAACGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAAGAGGCAGTAGAGGG
Suggested primer 2:CAGTCGTGCTTTGCTTTGCT