Insertion junction: CLIP2.077455_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077455
Chromosome:chromosome 3
Location:8649469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209953 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCATATCCTGATGCGGCCAGAGATAAGGCGATCGCCGTGTGACAACG
Internal bar code:ATGGGTATTTTGGCATGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2282
LEAP-Seq percent confirming:86.25
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTACTCAGCACCTCCC
Suggested primer 2:ACGTTCAACATTGCACCACG