Insertion junction: CLIP2.077467_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077467
Chromosome:chromosome 3
Location:1493262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGAGCCCCAATACACCGTCCTGAGTGGTCGTCTGTCCTAGCTAGGCG
Internal bar code:TTGATTTGCCCAATAAACGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:21.6216
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACGTGGCTATTCCGAG
Suggested primer 2:CCTCACGTACTGGTATCGCC