Insertion junction: CLIP2.077472_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077472
Chromosome:chromosome 17
Location:2282342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713350 OMT1 (1 of 2) PTHR10283:SF76 - DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC; Oxoglutarate:malate antiporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCCCCAACTGGCATGCTTGTCGCGTGTGCTGTAGTGTCTATGGCTTG
Internal bar code:CGGTGAATCCACCCGTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4738
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTGCACAGCATGACGGG
Suggested primer 2:AGAGCCACTCCCTTGAATGC