Insertion junction: CLIP2.077483_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077483
Chromosome:chromosome 9
Location:3406571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395732 (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGTTTGTTGCCTGCTGTGCTTTTGCTTGACAGCGGGACGCGGCTGG
Internal bar code:GGGCGCGCCGGTCTGGGTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATGCCTGTAGCCACACC
Suggested primer 2:GCTATTCGACTCGCTCGGAA