Insertion junction: CLIP2.077485_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077485
Chromosome:chromosome 6
Location:7136902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298100 SUI1A,SUI1 Translation initiation protein; (1 of 1) K03113 - translation initiation factor 1 (EIF1, SUI1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGCTCATAATCGCTGCTATCCTCGTAGCTCTTGTTCACCACCCTTC
Internal bar code:ATTAGCACTACCCACGGAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGGTCTCGCCGAGAGTT
Suggested primer 2:TTTGTGGTGGGGTTTGAGCT