Insertion junction: CLIP2.077489_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077489
Chromosome:chromosome 12
Location:685514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATATAGGACACTGAAAGTTTCGTGTGCCTGACAGCGACTCGATGTTT
Internal bar code:GGTTTGGCGGATCTTCAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGTGCATATTGTGTGAC
Suggested primer 2:CACCCCATTCTCTGTGCCAT