Insertion junction: CLIP2.077489_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077489
Chromosome:chromosome 12
Location:685533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCTGATCTTGCTCCGTGCAGCATTAGTTCTCTTGCACACACACATAT
Internal bar code:GGTTTGGCGGATCTTCAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:420
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCATTCTCTGTGCCAT
Suggested primer 2:GGCCGTGCATATTGTGTGAC