Insertion junction: CLIP2.077499_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077499
Chromosome:chromosome 16
Location:4051836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690350 SNR6 SNARE-associated Golgi protein; (1 of 1) PTHR12677:SF24 - TRANSMEMBRANE PROTEIN 64 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATTGCGCCCAAATGCTGCTGGGAGGTGCGCAGCCCGGCAATACGGAC
Internal bar code:GTGTTCAGCGATATAAAGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2615
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGTTGTTGGCCGTGTAC
Suggested primer 2:ACCTACTCCCTACCACGACC